FastQCFastQC Report
Mon 25 Mar 2013
23.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 23.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 26829094
Filtered Sequences 0
Sequence length 49
%GC 52

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 903649 3.3681681535723866 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 895191 3.3366426760441485 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 889240 3.31446153194737 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 739144 2.7550091702686643 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 690999 2.575558459037044 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 398218 1.4842767333104876 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 322311 1.2013488043986875 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 297283 1.1080620165556094 RNA PCR Primer, Index 1 (100% over 29bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 200255 0.7464098489498006 RNA PCR Primer, Index 1 (100% over 33bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 187473 0.6987675394480335 RNA PCR Primer, Index 1 (100% over 28bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACAC 156492 0.5832921529142953 RNA PCR Primer, Index 5 (100% over 35bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 146585 0.5463658221183317 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 145433 0.542071976042128 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 143881 0.5362872111894647 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 139188 0.5187950066446523 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 137867 0.5138712473853944 RNA PCR Primer, Index 1 (100% over 25bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACACA 128599 0.4793266593348251 RNA PCR Primer, Index 5 (100% over 36bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 105830 0.3944598352818026 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 105580 0.39352801104651536 RNA PCR Primer, Index 1 (100% over 26bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 100565 0.37483561688665296 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 92661 0.34537506186381095 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 91979 0.34283304534994735 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 91453 0.34087248715890295 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 88575 0.330145326562276 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 85188 0.3175209718226042 RNA PCR Primer, Index 1 (100% over 34bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 77924 0.2904458868420976 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 77619 0.28930906127504713 No Hit
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 73477 0.27387059734480784 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 66462 0.24772360930264736 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 65038 0.24241593845845114 No Hit
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 62874 0.2343500678778046 RNA PCR Primer, Index 1 (100% over 25bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 60694 0.22622456054609968 RNA PCR Primer, Index 1 (100% over 26bp)
GTCGCCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCACACAGTGATC 60687 0.22619846946751163 RNA PCR Primer, Index 5 (100% over 42bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 59731 0.22263517359177318 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 58444 0.21783814242851435 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 58191 0.21689513630240362 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 57592 0.21466248543465538 RNA PCR Primer, Index 1 (100% over 28bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 57379 0.21386857118619063 RNA PCR Primer, Index 1 (100% over 24bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 57262 0.2134324774440762 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 51251 0.19102769553082932 RNA PCR Primer, Index 1 (100% over 30bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 48986 0.18258536795912678 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 48756 0.1817280896626625 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 46632 0.17381131095966193 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 46347 0.17274903133143443 RNA PCR Primer, Index 1 (100% over 27bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC 46078 0.17174638845426535 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 45843 0.17087047367309532 No Hit
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 44133 0.16449679590373048 RNA PCR Primer, Index 1 (100% over 27bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 41165 0.15343417858240013 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 40886 0.15239426273581955 No Hit
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTTGGAATTCTCGGGTGCC 40039 0.14923724222666632 No Hit
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 39872 0.14861478363749442 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 39434 0.14698222757727114 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 39016 0.14542421745587086 RNA PCR Primer, Index 1 (100% over 31bp)
TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 38754 0.1444476656572898 RNA PCR Primer, Index 1 (100% over 31bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 37709 0.14055264035378906 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 36517 0.13610970239993941 RNA PCR Primer, Index 1 (100% over 25bp)
CCCCCCACTGCTAAATTTGACTGGCTTGGAATTCTCGGGTGCCAAGGAA 35322 0.13165558255526633 RNA PCR Primer, Index 1 (100% over 23bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 33584 0.12517754047154928 RNA PCR Primer, Index 1 (100% over 32bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 33491 0.12483090185602243 RNA PCR Primer, Index 1 (100% over 25bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 33333 0.12424198893932087 RNA PCR Primer, Index 1 (100% over 27bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 33278 0.12403698760755767 No Hit
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 32678 0.12180060944286825 RNA PCR Primer, Index 1 (100% over 25bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 32582 0.12144278893651796 No Hit
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 32249 0.12020159905511531 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 31494 0.1173874898645478 RNA PCR Primer, Index 1 (100% over 25bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 31479 0.11733158041043056 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 31254 0.11649293859867203 No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 30978 0.11546420464291489 No Hit
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 29604 0.1103428986457761 RNA PCR Primer, Index 1 (100% over 28bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 29233 0.10896007148060982 No Hit
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 28236 0.10524395643028424 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 27754 0.1034473993046504 No Hit
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 27167 0.1012594760001959 RNA PCR Primer, Index 1 (100% over 26bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 27179270 29.262032 253.74664 26
TTCTC 27270415 28.940207 249.65437 28
ATTCT 27120300 28.76186 249.91423 27
TCTCG 27226470 24.329845 210.25934 29
GAATT 27228695 24.299656 210.85637 25
TGCCA 25484555 23.119015 213.49248 36
AACTC 20642095 22.576265 256.65805 44
GCCAA 24161650 22.251696 216.84277 37
CCAAG 24043185 22.142591 216.91238 38
GAACT 23759555 21.539875 212.82951 43
GGAAT 27124585 20.3833 178.38832 24
TGGAA 26990590 20.28261 178.43468 23
CTCGG 26863725 20.214008 177.66327 30
ACTCC 17863405 19.550144 256.89667 45
GTGCC 25364105 19.085596 177.24164 35
CAAGG 23795615 18.16519 179.77484 39
AAGGA 23482340 17.914183 179.5571 40
AGGAA 23077055 17.605 179.52771 41
GGAAC 22853600 17.44607 179.44353 42
TCGGG 26681395 16.641838 147.26271 31
CGGGT 26406570 16.470425 146.95682 32
GGTGC 25972205 16.1995 147.05872 34
CTCCA 12807085 14.016385 78.29612 45
GGGTG 26369640 13.633378 121.900154 33
TCCAG 11697950 10.612117 51.523457 45
CCAGT 10899835 9.888084 37.73933 42
CAGTC 9423560 8.5488405 37.723534 43
AGTCA 9042550 8.197771 37.694332 44
TCACA 7454550 8.153044 43.486847 44
TTGGA 10584305 7.8348303 104.3507 22
GTCAC 7644950 6.935326 37.72899 45
CACAC 5914620 6.5713825 44.1962 45
ACACA 5102415 5.66524 41.513935 45
CTGGA 6502495 4.8896613 36.03322 23
CACAG 4871795 4.486684 27.819868 45
GTGGA 7152020 4.457938 21.01216 20
ATGGA 5278000 3.966257 43.23067 22
GACTG 5239785 3.9401457 103.222565 11
ACAGT 4300730 3.8989444 25.355198 4
TCAGA 4125090 3.7397132 126.44955 8
CTTGG 4994775 3.699734 31.793146 23
TTATC 3482850 3.693663 144.42426 5
TATCA 3265900 3.5161679 146.6343 6
TGATG 4675445 3.460909 101.03356 14
CTTAT 3101860 3.289612 144.30219 4
CTGAT 3642025 3.2523973 121.89389 13
TGTTG 4440935 3.2381532 98.79926 17
ACTGA 3534180 3.2040076 123.68395 12
CAGAC 3395185 3.1267984 125.710396 9
AGACT 3448055 3.1259286 123.98906 10
AGCTT 3476780 3.1048303 121.37254 2
CAGTG 4102075 3.084625 21.306175 5
ATCAG 3392315 3.0753958 124.00334 7
GTTGA 4028540 2.9820502 94.66555 18
TAGCT 3311445 2.9571831 121.349045 1
ATGTT 3228490 2.8381052 119.72666 16
GCTTA 3117085 2.7836158 121.30114 3
ACTTG 2991205 2.6712027 29.86195 22
TTGAC 2928210 2.6149468 75.85563 19
GATGT 3416425 2.5289433 101.01008 15
TGACT 2774025 2.4772568 66.99011 20
TTTGG 3162045 2.3056376 47.72797 21
ACTGG 3022170 2.272572 32.347736 22
GTAGT 3065935 2.2694998 61.498177 5
CGTGG 3304885 2.0613375 10.24354 19
AGTGA 2697420 2.0270295 17.805923 45
TAGTA 2072765 1.849794 74.06596 6
GACTT 2045325 1.8265139 29.371613 21
GGTAG 2860535 1.7830052 52.64445 4
TAGTT 2013940 1.7704171 63.754345 18
AGTAG 2288355 1.7196295 62.472267 7
AGGTA 2251195 1.6917049 63.94727 3
TTGTA 1865645 1.6400537 62.94713 13
TGTGG 2643285 1.6229502 8.422409 20
GTAGA 2156740 1.6207248 43.944668 8
CCGTG 2149695 1.6175699 11.333913 18
ATAGT 1803825 1.6097844 65.16182 17
AGATT 1753115 1.5645293 51.436802 10
TGTAT 1773825 1.5593364 61.47011 14
GTTGG 2535970 1.5570599 27.741335 21
AGTGG 2482990 1.547677 17.877485 6
GTGAT 2074205 1.5353906 14.975723 44
GTTTG 2097150 1.5291585 45.377876 20
TATAG 1686210 1.5048214 61.33348 16
GTATA 1686090 1.5047144 61.47703 15
ATTGT 1706810 1.5004249 50.972687 12
GATTG 1995625 1.4772233 43.819008 11
TTCCC 1367160 1.4738755 10.666007 8
ACTGT 1620775 1.4473827 34.787308 18
AGTTT 1640460 1.4420978 49.13069 19
TCCCG 1583935 1.4378612 14.768384 12
GATGG 2303340 1.4356991 30.593561 21
TGAGG 2249535 1.4021617 50.657516 1
TGATC 1555670 1.3892428 18.053793 45
CTGTT 1567895 1.3792195 38.593983 19
TAGAT 1540155 1.3744779 51.369144 9
GAGGT 2185240 1.3620859 53.318855 2
AGAAC 1471550 1.3543289 36.51994 15
CATGG 1783055 1.3407985 5.8383 23
GTTCC 1483570 1.3257331 16.416618 15
GCTTG 1780815 1.3190868 19.583614 20
GCTGG 2107700 1.314624 11.108703 2
AGTTG 1752175 1.2970141 29.449478 9
AACTG 1422900 1.2899688 35.54402 17
CCCGT 1394220 1.2656422 9.245787 10
CTGTG 1666740 1.2345891 8.738028 21
GTGGT 2001810 1.2290909 12.849407 15
AAGAA 1316905 1.2112008 36.667934 14
AAGCT 1300265 1.1787908 36.206512 1
AGGCT 1507810 1.1338235 18.384619 18
CACGT 1248825 1.1329058 9.065023 4
GGCTT 1527995 1.1318177 21.215792 19
AGCTG 1497850 1.1263338 29.689413 2
CGTTC 1236355 1.1048192 8.887784 6
TTGAA 1218540 1.0874594 35.774353 11
TTGAT 1236285 1.0867951 37.58357 19
GGCTG 1674205 1.0442425 10.47444 1
GGTGG 2012605 1.0405377 6.3487706 6
ACGTT 1158150 1.0342498 8.86365 5
CAGTT 1155800 1.0321512 35.415512 8
GGACT 1349990 1.0151479 23.07082 4
AATCC 913775 0.99939597 25.208555 8
CTGCC 1076065 0.97682804 36.123745 4
GCACT 1068355 0.9691876 17.531322 5
GCTAA 1068400 0.9685872 35.526142 10
GCCTG 1280795 0.9637533 11.874309 17
CAGAA 1044490 0.9612877 26.74374 15
TGGTG 1553900 0.95407873 6.309119 5
ACCAC 855845 0.95087844 11.963058 2
CCTGT 1057330 0.9448406 13.616906 18
GATCT 1057985 0.9448006 14.073451 45
GCTGT 1265615 0.9374674 6.971555 11
TGGCT 1265440 0.9373378 21.187788 8
TTCAA 860140 0.92605305 28.248533 1
CACTT 857330 0.92363864 20.374357 6
TAGTG 1233355 0.91296744 12.417324 15
CCACG 984730 0.9074882 9.11709 3
GCCAG 1180785 0.90198904 30.677528 6
TGAAG 1183535 0.8893907 29.996515 12
ATCTC 808630 0.8711721 10.255866 45
CCACT 793090 0.8679769 12.960817 5
GAAGA 1105190 0.84312624 30.279058 13
CAGGA 1098685 0.8387184 20.201612 12
AGGAT 1092625 0.8210746 19.843288 13
ATTGG 1102555 0.81614524 6.3292875 3
CCCCC 721775 0.8029833 14.979472 1
CCAGG 1048220 0.80072397 17.75939 11
CAAGT 862115 0.78157395 23.926414 3
CCCAC 702320 0.7808226 13.294708 4
CACCA 699775 0.7774784 11.438282 1
CACTG 855720 0.7762899 11.136055 6
TTCTG 875600 0.7702331 8.230505 16
GCTGC 1013390 0.76254034 29.629194 3
TTCAC 707525 0.76224726 29.932865 1
AAGTA 832340 0.7540815 23.825783 4
GGCTA 1002090 0.7535386 20.929564 9
TGGAC 980320 0.73716825 22.460157 3
GTAAT 823920 0.73528945 23.794827 6
CTAAG 806185 0.73086905 25.566511 11
GACCT 791125 0.7176908 6.0327263 5
GAAGG 1134015 0.7175768 18.06278 17
TATGG 952480 0.7050551 6.60959 22
ATTTG 800665 0.7038497 10.509899 15
TAAGT 788345 0.70354134 25.142393 12
AAGTT 780755 0.6967678 24.768852 13
AAGGC 908595 0.69360685 18.404417 18
AGTTC 765740 0.6838203 24.388346 14
CATTG 756070 0.6751848 9.415574 2
GGCCT 896510 0.67459226 12.061198 16
GTCAG 889040 0.66852874 22.002352 13
TGCTG 898445 0.66549695 5.71251 16
TCCGT 741300 0.662433 13.290867 17
TCAGT 741610 0.66227174 12.781826 12
ATACC 599515 0.6556898 7.564622 19
TCCTT 616240 0.6539729 8.380916 11
CTACT 601285 0.6477903 7.8935094 8
ATTCC 593970 0.63990957 6.8636427 1
ATCCA 583755 0.638453 24.94356 9
TAATC 590665 0.63592803 24.759169 7
AGTAA 701615 0.63564754 23.843763 5
TGCAC 698550 0.63370883 17.556849 4
GGATA 842655 0.6332296 19.706913 14
AGAAG 830005 0.6331934 22.104954 16
TAGGC 832125 0.6257305 17.541014 17
CCCGG 815455 0.6233297 11.90044 13
ATAGG 823510 0.61884284 19.981472 16
CTTGT 700270 0.6160017 16.746523 8
ATTGC 688200 0.6145756 17.689379 2
AGAAT 676665 0.6130434 8.785829 20
GTCCC 674020 0.61186045 14.248228 11
TCAAG 674205 0.611219 23.81535 2
TTGCA 683890 0.6107268 17.529596 3
GAGTC 809780 0.60892785 22.023249 11
GCCCA 660660 0.6088382 5.6503987 11
TCGGT 811300 0.60094684 6.665706 15
TCTCA 556545 0.59959 9.817491 25
GATAG 794965 0.59739214 19.6704 15
TGTCC 666010 0.5951532 13.569099 10
TTTTG 685955 0.5939918 7.1425996 14
TTGTG 813790 0.5933833 6.019937 13
GTCCG 787700 0.5927165 13.973902 6
TCCCA 540815 0.59188104 8.360895 9
CTGCT 660380 0.59012216 10.863361 8
CTGGT 796570 0.59003603 13.208313 3
TCGCC 648750 0.58892095 7.8313136 27
TGGTT 806330 0.5879438 7.410476 8
CGGCC 768350 0.5873228 12.01872 15
GGAGT 932990 0.5815436 18.395481 10
CTTCT 544875 0.5782382 7.619155 1
TGGAG 927140 0.5778973 18.395061 9
ACTGC 633970 0.5751233 10.675224 7
CCGGC 752140 0.574932 11.907284 14
CTGTC 640975 0.5727817 8.434851 12
AATTT 539765 0.5720577 12.31889 14
CACTA 519820 0.5685273 7.3878956 6
AACAT 519860 0.5681949 11.999296 5
TTCCG 634180 0.5667096 14.149504 16
TTTGA 639705 0.5623527 10.214826 16
GTGGC 900150 0.56144553 18.48708 7
TATTG 633845 0.5572013 13.930791 1
CCCAA 496625 0.55177057 10.199001 10
TTGTC 621770 0.5469482 16.648169 9
GTTAT 616410 0.5418745 9.040196 21
TAGAA 597340 0.54117674 8.750181 19
TCCGA 593040 0.53799254 16.118452 7
AAATT 493295 0.53074515 12.545718 13
TACTG 593880 0.5303461 6.410602 9
CTGTA 591785 0.5284752 5.217082 19
AGCTC 581770 0.5277686 5.1756687 9
GGTCC 692700 0.52123237 13.813093 5
AGGTT 697730 0.5164813 12.384495 10
AACTT 478900 0.51559836 5.5256433 29
TGGTC 695730 0.51534176 13.216315 4
CCCCA 462760 0.5144854 13.364004 3
ACTAC 466955 0.5107088 7.5168257 7
ACGGA 666295 0.50863886 7.154747 3
GTGCT 683735 0.5064568 5.6171904 15
TAAAT 469955 0.5056333 12.339446 12
GGTTG 814840 0.50030345 10.395894 11
ATCCC 456380 0.49947336 13.343996 8
GAATC 547220 0.4960973 7.415523 6
CTTGA 551845 0.492808 6.4466615 16
GTAGG 776515 0.484011 10.519797 8
GTCGG 765030 0.47716787 5.731012 14
AAAGA 518590 0.4769643 7.35305 2
AGCAG 622785 0.47542414 5.9836373 16
CGATG 630980 0.4744762 6.648388 9
CGGAA 618930 0.47248122 6.23335 4
GTTGT 646835 0.47164643 9.377636 12
CGCCT 517520 0.46979326 5.439828 29
CAAAG 509400 0.46882206 9.334139 1
ACTAG 516875 0.46858716 5.895067 1
TACCA 426575 0.4665452 7.898262 23
TAGGT 625790 0.4632291 12.0197935 9
TGGTA 624565 0.4623223 7.507615 16
GCATT 517410 0.4620569 9.236205 1
TGTAG 620455 0.45927995 5.8456984 11
CCAAA 411055 0.45639664 8.456992 11
ACATT 422290 0.4546503 9.593727 2
CTCCT 417880 0.4504982 8.517187 10
CCACC 403835 0.44897404 5.831429 4
AAAGC 484770 0.44615403 7.1238523 14
GTAAA 487380 0.4415554 10.157089 2
AAGCA 477075 0.439072 7.238973 15
CTCAC 401060 0.43892977 7.6617694 4
GGTTA 590270 0.43693608 6.590521 17
GTTCT 495895 0.43622065 8.115328 15
CTTTT 416735 0.4353497 8.28892 13
ATCCT 403360 0.43455717 7.430098 8
ACATC 394160 0.43109292 12.29856 6
ACATG 473775 0.4295137 6.1823454 22
TTTGT 489440 0.4238228 8.499532 12
TGTAA 474345 0.42331886 10.063214 1
TGAGT 569630 0.4216577 6.9104066 18
AGACC 457360 0.4212061 6.3843317 4
CGCTG 559545 0.42103797 6.2118087 10
ACCTC 383555 0.4197719 5.166498 5
CCTTT 388815 0.41262248 8.390465 12
CTAAA 375210 0.41009578 12.519345 11
GGTTC 551965 0.40885204 7.562295 9
CGGTG 650620 0.4058076 5.6803565 16
CAACG 438550 0.40388298 7.41113 1
ACCCT 363380 0.39769185 5.0997076 21
GAGTT 533775 0.39511675 7.084073 19
TCTCC 365540 0.3940727 8.664403 9
TGACA 431270 0.39097962 6.043503 20
TAAAC 354110 0.38703406 12.230765 3
TTGGT 526975 0.38424927 6.452355 4
GGGTT 624680 0.38354716 5.0740867 19
AAACA 345190 0.3830129 12.428195 4
CCGAA 414670 0.38189068 9.43693 8
AACGC 414665 0.38188607 7.6377225 8
AAGGT 504885 0.3794058 7.041784 11
GCAGC 489275 0.3737519 5.81643 17
TCACT 345985 0.3727446 7.4018946 5
ATCAC 338760 0.3705019 7.084968 21
GTGAG 581550 0.362487 5.8260827 17
ATTCA 336550 0.36234003 9.491031 4
AAATA 330530 0.36102265 5.506441 12
TTCAG 400435 0.35759604 8.674373 11
CCGAT 391865 0.3554911 7.012255 8
AAAAG 385545 0.35459843 7.2769327 13
CATTC 328590 0.3540042 9.679129 3
CTAGT 396260 0.35386768 5.276258 21
CATCC 322520 0.35297373 12.053595 7
TGGGC 562300 0.35072023 5.2203817 17
CGACT 380565 0.34524003 6.2747054 13
GACTA 374995 0.339962 6.3947906 19
CAGCT 371735 0.3372296 7.580322 18
CTCAA 305995 0.3346668 8.95035 26
AGTTA 374435 0.33415636 8.154299 20
TACCC 304230 0.3329567 5.2220793 20
GACAT 366725 0.3324646 6.0194364 21
TGCTA 372245 0.33242184 10.180539 9
CCAGA 360360 0.33187386 6.5960946 25
CAGCA 360280 0.33180016 5.6273217 4
CTCGC 365175 0.3314978 8.319743 26
TATCT 305760 0.3242673 9.674677 23
TTCCA 300595 0.323844 5.5975986 2
GTTCA 361740 0.3230407 8.788888 10
TGTTT 372165 0.32227036 5.3890553 19
CAAAA 288955 0.32061616 8.83831 12
AGCCC 346815 0.31961104 5.9649086 10
AACGG 416670 0.3180792 7.0632815 2
CTAGA 348130 0.31560677 5.781636 2
TCAAC 287700 0.31465757 8.827042 6
TCAAT 285980 0.3078948 8.803775 27
GAAGC 396940 0.30301762 6.0996904 19
GGAAG 469100 0.29683492 5.3418145 18
CGAAG 386900 0.2953533 7.313662 9
TCCAC 269555 0.2950075 5.500309 3
TTTCC 269335 0.28582665 7.059329 2
TTGGG 465350 0.28572017 5.1911206 16
TAGAC 312860 0.2836318 5.9876723 3
ACCAG 291800 0.26873344 6.657805 24
TCCCC 242760 0.26585826 5.0985003 9
ACGCT 292660 0.26549456 7.280019 9
ATGGT 348840 0.25822213 5.5251284 11
CTAGC 283060 0.25678566 5.5034337 8
TGTCG 344785 0.25538948 6.552647 13
AGTGT 343365 0.25416937 5.186573 9
CAATT 235615 0.2536703 6.3109097 28
GTTTC 287755 0.2531275 5.923722 1
AAGAT 273330 0.24763088 5.5035763 16
CTGCA 272565 0.24726482 6.2140675 11
CCGTA 269235 0.24424392 6.598562 5
TTACC 223755 0.24106093 7.7683764 22
TAGCC 264630 0.24006636 5.6007833 9
AGATA 254190 0.23029047 5.1313996 17
TTCGC 249795 0.2232193 5.567295 27
CGTAG 293685 0.22084142 5.606468 6
CATAG 242780 0.22009885 6.4203305 16
GTGTA 293400 0.21718374 5.45069 10
TGTGC 284790 0.21094991 5.470379 14
TCACG 217965 0.19773294 5.7306848 22
GTTAC 218910 0.19549078 6.4692526 21
ACCTA 172010 0.18812738 6.527951 6
CCTAG 193090 0.17516689 5.445881 7